Gene : evm_27.TU.AmTr_v1.0_scaffold00045.123 A. trichopoda v1.0
Defline:  (1 of 1) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  122
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.123 Secondary Identifier:  ? PAC:31567616
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  
Atrichopoda PWY-5690 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.123 0.5kb upstream 0.5kb upstream 12884 true AmTr_v1.0_scaffold00045: 1679028-1691911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 1691412-1691911 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 0.5kb downstream 0.5kb downstream 12884 true AmTr_v1.0_scaffold00045: 1678528-1691411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 1678528-1679027 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 1.0kb upstream 1.0kb upstream 13384 true AmTr_v1.0_scaffold00045: 1679028-1692411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 1691412-1692411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 1.0kb downstream 1.0kb downstream 13384 true AmTr_v1.0_scaffold00045: 1678028-1691411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 1678028-1679027 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 2.0kb upstream 2.0kb upstream 14384 true AmTr_v1.0_scaffold00045: 1679028-1693411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 1691412-1693411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 2.0kb downstream 2.0kb downstream 14384 true AmTr_v1.0_scaffold00045: 1677028-1691411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 1677028-1679027 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 5.0kb upstream 5.0kb upstream 17384 true AmTr_v1.0_scaffold00045: 1679028-1696411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 1691412-1696411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 5.0kb downstream 5.0kb downstream 17384 true AmTr_v1.0_scaffold00045: 1674028-1691411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 1674028-1679027 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 10.0kb upstream 10.0kb upstream 22384 true AmTr_v1.0_scaffold00045: 1679028-1701411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 1691412-1701411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 10.0kb downstream 10.0kb downstream 22384 true AmTr_v1.0_scaffold00045: 1669028-1691411 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.123 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 1669028-1679027 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain