Gene : evm_27.TU.AmTr_v1.0_scaffold00044.9 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11404:SF17 - SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  9
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.9 Secondary Identifier:  ? PAC:31575511
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda DETOX1-PWY Amborella trichopoda pathologic  
Atrichopoda DETOX1-PWY-1 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.9 0.5kb upstream 0.5kb upstream 7681 true AmTr_v1.0_scaffold00044: 233909-241589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 233909-234408 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 0.5kb downstream 0.5kb downstream 7681 true AmTr_v1.0_scaffold00044: 234409-242089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 241590-242089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 1.0kb upstream 1.0kb upstream 8181 true AmTr_v1.0_scaffold00044: 233409-241589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 233409-234408 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 1.0kb downstream 1.0kb downstream 8181 true AmTr_v1.0_scaffold00044: 234409-242589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 241590-242589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 2.0kb upstream 2.0kb upstream 9181 true AmTr_v1.0_scaffold00044: 232409-241589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 232409-234408 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 2.0kb downstream 2.0kb downstream 9181 true AmTr_v1.0_scaffold00044: 234409-243589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 241590-243589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 5.0kb upstream 5.0kb upstream 12181 true AmTr_v1.0_scaffold00044: 229409-241589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 229409-234408 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 5.0kb downstream 5.0kb downstream 12181 true AmTr_v1.0_scaffold00044: 234409-246589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 241590-246589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 10.0kb upstream 10.0kb upstream 17181 true AmTr_v1.0_scaffold00044: 224409-241589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 224409-234408 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 10.0kb downstream 10.0kb downstream 17181 true AmTr_v1.0_scaffold00044: 234409-251589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.9 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 241590-251589 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain