Gene : evm_27.TU.AmTr_v1.0_scaffold00048.58 A. trichopoda v1.0
Defline:  (1 of 2) PTHR31062:SF44 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED Genomic Order:  58
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.58 Secondary Identifier:  ? PAC:31555511
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.58 0.5kb upstream 0.5kb upstream 5015 true AmTr_v1.0_scaffold00048: 1461794-1466808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 1461794-1462293 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 0.5kb downstream 0.5kb downstream 5015 true AmTr_v1.0_scaffold00048: 1462294-1467308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 1466809-1467308 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 1.0kb upstream 1.0kb upstream 5515 true AmTr_v1.0_scaffold00048: 1461294-1466808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 1461294-1462293 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 1.0kb downstream 1.0kb downstream 5515 true AmTr_v1.0_scaffold00048: 1462294-1467808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 1466809-1467808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 2.0kb upstream 2.0kb upstream 6515 true AmTr_v1.0_scaffold00048: 1460294-1466808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 1460294-1462293 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 2.0kb downstream 2.0kb downstream 6515 true AmTr_v1.0_scaffold00048: 1462294-1468808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 1466809-1468808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 5.0kb upstream 5.0kb upstream 9515 true AmTr_v1.0_scaffold00048: 1457294-1466808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 1457294-1462293 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 5.0kb downstream 5.0kb downstream 9515 true AmTr_v1.0_scaffold00048: 1462294-1471808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 1466809-1471808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 10.0kb upstream 10.0kb upstream 14515 true AmTr_v1.0_scaffold00048: 1452294-1466808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 1452294-1462293 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 10.0kb downstream 10.0kb downstream 14515 true AmTr_v1.0_scaffold00048: 1462294-1476808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.58 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 1466809-1476808 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain