Gene : evm_27.TU.AmTr_v1.0_scaffold00048.62 A. trichopoda v1.0
Defline:  (1 of 1) PTHR35695:SF1 - GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  62
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.62 Secondary Identifier:  ? PAC:31555647
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY0-1319 Amborella trichopoda pathologic  
Atrichopoda PWY4FS-7 Amborella trichopoda pathologic  
Atrichopoda PWY-7411 Amborella trichopoda pathologic  
Atrichopoda TRIGLSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.62 0.5kb upstream 0.5kb upstream 18043 true AmTr_v1.0_scaffold00048: 1559417-1577459 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 1576960-1577459 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 0.5kb downstream 0.5kb downstream 18043 true AmTr_v1.0_scaffold00048: 1558917-1576959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 1558917-1559416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 1.0kb upstream 1.0kb upstream 18543 true AmTr_v1.0_scaffold00048: 1559417-1577959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 1576960-1577959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 1.0kb downstream 1.0kb downstream 18543 true AmTr_v1.0_scaffold00048: 1558417-1576959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 1558417-1559416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 2.0kb upstream 2.0kb upstream 19543 true AmTr_v1.0_scaffold00048: 1559417-1578959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 1576960-1578959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 2.0kb downstream 2.0kb downstream 19543 true AmTr_v1.0_scaffold00048: 1557417-1576959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 1557417-1559416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 5.0kb upstream 5.0kb upstream 22543 true AmTr_v1.0_scaffold00048: 1559417-1581959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 1576960-1581959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 5.0kb downstream 5.0kb downstream 22543 true AmTr_v1.0_scaffold00048: 1554417-1576959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 1554417-1559416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 10.0kb upstream 10.0kb upstream 27543 true AmTr_v1.0_scaffold00048: 1559417-1586959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 1576960-1586959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 10.0kb downstream 10.0kb downstream 27543 true AmTr_v1.0_scaffold00048: 1549417-1576959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.62 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 1549417-1559416 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain