Gene : evm_27.TU.AmTr_v1.0_scaffold00048.52 A. trichopoda v1.0
Defline:  (1 of 3) PTHR24078:SF193 - DNAJ HOMOLOG SUBFAMILY C MEMBER 2 Genomic Order:  52
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.52 Secondary Identifier:  ? PAC:31555646
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.52 0.5kb upstream 0.5kb upstream 1430 true AmTr_v1.0_scaffold00048: 1314452-1315881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 1315382-1315881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 0.5kb downstream 0.5kb downstream 1430 true AmTr_v1.0_scaffold00048: 1313952-1315381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 1313952-1314451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 1.0kb upstream 1.0kb upstream 1930 true AmTr_v1.0_scaffold00048: 1314452-1316381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 1315382-1316381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 1.0kb downstream 1.0kb downstream 1930 true AmTr_v1.0_scaffold00048: 1313452-1315381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 1313452-1314451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 2.0kb upstream 2.0kb upstream 2930 true AmTr_v1.0_scaffold00048: 1314452-1317381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 1315382-1317381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 2.0kb downstream 2.0kb downstream 2930 true AmTr_v1.0_scaffold00048: 1312452-1315381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 1312452-1314451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 5.0kb upstream 5.0kb upstream 5930 true AmTr_v1.0_scaffold00048: 1314452-1320381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 1315382-1320381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 5.0kb downstream 5.0kb downstream 5930 true AmTr_v1.0_scaffold00048: 1309452-1315381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 1309452-1314451 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 10.0kb upstream 10.0kb upstream 10930 true AmTr_v1.0_scaffold00048: 1314452-1325381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 1315382-1325381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 10.0kb downstream 10.0kb downstream 10930 true AmTr_v1.0_scaffold00048: 1304452-1315381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.52 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 1304452-1314451 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain