Gene : evm_27.TU.AmTr_v1.0_scaffold00048.47 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10694:SF33 - TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN Genomic Order:  47
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.47 Secondary Identifier:  ? PAC:31555650
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.47 0.5kb upstream 0.5kb upstream 11591 true AmTr_v1.0_scaffold00048: 1147516-1159106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 1147516-1148015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 0.5kb downstream 0.5kb downstream 11591 true AmTr_v1.0_scaffold00048: 1148016-1159606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 1159107-1159606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 1.0kb upstream 1.0kb upstream 12091 true AmTr_v1.0_scaffold00048: 1147016-1159106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 1147016-1148015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 1.0kb downstream 1.0kb downstream 12091 true AmTr_v1.0_scaffold00048: 1148016-1160106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 1159107-1160106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 2.0kb upstream 2.0kb upstream 13091 true AmTr_v1.0_scaffold00048: 1146016-1159106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 1146016-1148015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 2.0kb downstream 2.0kb downstream 13091 true AmTr_v1.0_scaffold00048: 1148016-1161106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 1159107-1161106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 5.0kb upstream 5.0kb upstream 16091 true AmTr_v1.0_scaffold00048: 1143016-1159106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 1143016-1148015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 5.0kb downstream 5.0kb downstream 16091 true AmTr_v1.0_scaffold00048: 1148016-1164106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 1159107-1164106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 10.0kb upstream 10.0kb upstream 21091 true AmTr_v1.0_scaffold00048: 1138016-1159106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 1138016-1148015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 10.0kb downstream 10.0kb downstream 21091 true AmTr_v1.0_scaffold00048: 1148016-1169106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.47 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 1159107-1169106 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042889 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121310039 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain