Gene : evm_27.TU.AmTr_v1.0_scaffold00048.41 A. trichopoda v1.0
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  41
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.41 Secondary Identifier:  ? PAC:31555443
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.41 0.5kb upstream 0.5kb upstream 27551 true AmTr_v1.0_scaffold00048: 973390-1000940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 973390-973889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 0.5kb downstream 0.5kb downstream 27551 true AmTr_v1.0_scaffold00048: 973890-1001440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 1000941-1001440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 1.0kb upstream 1.0kb upstream 28051 true AmTr_v1.0_scaffold00048: 972890-1000940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 972890-973889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 1.0kb downstream 1.0kb downstream 28051 true AmTr_v1.0_scaffold00048: 973890-1001940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 1000941-1001940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 2.0kb upstream 2.0kb upstream 29051 true AmTr_v1.0_scaffold00048: 971890-1000940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 971890-973889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 2.0kb downstream 2.0kb downstream 29051 true AmTr_v1.0_scaffold00048: 973890-1002940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 1000941-1002940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 5.0kb upstream 5.0kb upstream 32051 true AmTr_v1.0_scaffold00048: 968890-1000940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 968890-973889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 5.0kb downstream 5.0kb downstream 32051 true AmTr_v1.0_scaffold00048: 973890-1005940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 1000941-1005940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 10.0kb upstream 10.0kb upstream 37051 true AmTr_v1.0_scaffold00048: 963890-1000940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 963890-973889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 10.0kb downstream 10.0kb downstream 37051 true AmTr_v1.0_scaffold00048: 973890-1010940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.41 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 1000941-1010940 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain