Gene : evm_27.TU.AmTr_v1.0_scaffold00049.128 A. trichopoda v1.0
Defline:  (1 of 3) PTHR13164 - CALICYLIN BINDING PROTEIN Genomic Order:  127
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00049.128 Secondary Identifier:  ? PAC:31574571
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00049.128 0.5kb upstream 0.5kb upstream 16780 true AmTr_v1.0_scaffold00049: 2168712-2185491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00049: 2168712-2169211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 0.5kb downstream 0.5kb downstream 16780 true AmTr_v1.0_scaffold00049: 2169212-2185991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00049: 2185492-2185991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 1.0kb upstream 1.0kb upstream 17280 true AmTr_v1.0_scaffold00049: 2168212-2185491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00049: 2168212-2169211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 1.0kb downstream 1.0kb downstream 17280 true AmTr_v1.0_scaffold00049: 2169212-2186491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00049: 2185492-2186491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 2.0kb upstream 2.0kb upstream 18280 true AmTr_v1.0_scaffold00049: 2167212-2185491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00049: 2167212-2169211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 2.0kb downstream 2.0kb downstream 18280 true AmTr_v1.0_scaffold00049: 2169212-2187491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00049: 2185492-2187491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 5.0kb upstream 5.0kb upstream 21280 true AmTr_v1.0_scaffold00049: 2164212-2185491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00049: 2164212-2169211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 5.0kb downstream 5.0kb downstream 21280 true AmTr_v1.0_scaffold00049: 2169212-2190491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00049: 2185492-2190491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 10.0kb upstream 10.0kb upstream 26280 true AmTr_v1.0_scaffold00049: 2159212-2185491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00049: 2159212-2169211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 10.0kb downstream 10.0kb downstream 26280 true AmTr_v1.0_scaffold00049: 2169212-2195491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.128 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00049: 2185492-2195491 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042859 5273 Angiosperm View MSA
121310036 5274 Embryophyte View MSA
123347639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain