Gene : evm_27.TU.AmTr_v1.0_scaffold00048.178 A. trichopoda v1.0
Defline:  (1 of 3) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  177
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.178 Secondary Identifier:  ? PAC:31555609
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.178 0.5kb upstream 0.5kb upstream 2398 true AmTr_v1.0_scaffold00048: 3910119-3912516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 3910119-3910618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 0.5kb downstream 0.5kb downstream 2398 true AmTr_v1.0_scaffold00048: 3910619-3913016 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 3912517-3913016 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 1.0kb upstream 1.0kb upstream 2898 true AmTr_v1.0_scaffold00048: 3909619-3912516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 3909619-3910618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 1.0kb downstream 1.0kb downstream 2898 true AmTr_v1.0_scaffold00048: 3910619-3913516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 3912517-3913516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 2.0kb upstream 2.0kb upstream 3898 true AmTr_v1.0_scaffold00048: 3908619-3912516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 3908619-3910618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 2.0kb downstream 2.0kb downstream 3898 true AmTr_v1.0_scaffold00048: 3910619-3914516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 3912517-3914516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 5.0kb upstream 5.0kb upstream 6898 true AmTr_v1.0_scaffold00048: 3905619-3912516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 3905619-3910618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 5.0kb downstream 5.0kb downstream 6898 true AmTr_v1.0_scaffold00048: 3910619-3917516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 3912517-3917516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 10.0kb upstream 10.0kb upstream 11898 true AmTr_v1.0_scaffold00048: 3900619-3912516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 3900619-3910618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 10.0kb downstream 10.0kb downstream 11898 true AmTr_v1.0_scaffold00048: 3910619-3922516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.178 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 3912517-3922516 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050096 5273 Angiosperm View MSA
121311737 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain