Gene : evm_27.TU.AmTr_v1.0_scaffold00048.18 A. trichopoda v1.0
Defline:  (1 of 1) PTHR19854:SF15 - TRANSDUCIN BETA-LIKE PROTEIN 3 Genomic Order:  18
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.18 Secondary Identifier:  ? PAC:31555492
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.18 0.5kb upstream 0.5kb upstream 21281 true AmTr_v1.0_scaffold00048: 514066-535346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 514066-514565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 0.5kb downstream 0.5kb downstream 21281 true AmTr_v1.0_scaffold00048: 514566-535846 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 535347-535846 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 1.0kb upstream 1.0kb upstream 21781 true AmTr_v1.0_scaffold00048: 513566-535346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 513566-514565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 1.0kb downstream 1.0kb downstream 21781 true AmTr_v1.0_scaffold00048: 514566-536346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 535347-536346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 2.0kb upstream 2.0kb upstream 22781 true AmTr_v1.0_scaffold00048: 512566-535346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 512566-514565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 2.0kb downstream 2.0kb downstream 22781 true AmTr_v1.0_scaffold00048: 514566-537346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 535347-537346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 5.0kb upstream 5.0kb upstream 25781 true AmTr_v1.0_scaffold00048: 509566-535346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 509566-514565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 5.0kb downstream 5.0kb downstream 25781 true AmTr_v1.0_scaffold00048: 514566-540346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 535347-540346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 10.0kb upstream 10.0kb upstream 30781 true AmTr_v1.0_scaffold00048: 504566-535346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 504566-514565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 10.0kb downstream 10.0kb downstream 30781 true AmTr_v1.0_scaffold00048: 514566-545346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.18 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 535347-545346 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041178 5273 Angiosperm View MSA
121349403 5274 Embryophyte View MSA
123428044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain