Gene : evm_27.TU.AmTr_v1.0_scaffold00048.205 A. trichopoda v1.0
Defline:  (1 of 3) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  203
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.205 Secondary Identifier:  ? PAC:31555488
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-1422 Amborella trichopoda pathologic  
Atrichopoda PWY-7436 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.205 0.5kb upstream 0.5kb upstream 9731 true AmTr_v1.0_scaffold00048: 4485684-4495414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 4485684-4486183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 0.5kb downstream 0.5kb downstream 9731 true AmTr_v1.0_scaffold00048: 4486184-4495914 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 4495415-4495914 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 1.0kb upstream 1.0kb upstream 10231 true AmTr_v1.0_scaffold00048: 4485184-4495414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 4485184-4486183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 1.0kb downstream 1.0kb downstream 10231 true AmTr_v1.0_scaffold00048: 4486184-4496414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 4495415-4496414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 2.0kb upstream 2.0kb upstream 11231 true AmTr_v1.0_scaffold00048: 4484184-4495414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 4484184-4486183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 2.0kb downstream 2.0kb downstream 11231 true AmTr_v1.0_scaffold00048: 4486184-4497414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 4495415-4497414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 5.0kb upstream 5.0kb upstream 14231 true AmTr_v1.0_scaffold00048: 4481184-4495414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 4481184-4486183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 5.0kb downstream 5.0kb downstream 14231 true AmTr_v1.0_scaffold00048: 4486184-4500414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 4495415-4500414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 10.0kb upstream 10.0kb upstream 19231 true AmTr_v1.0_scaffold00048: 4476184-4495414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 4476184-4486183 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 10.0kb downstream 10.0kb downstream 19231 true AmTr_v1.0_scaffold00048: 4486184-4505414 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.205 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 4495415-4505414 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain