Gene : evm_27.TU.AmTr_v1.0_scaffold00048.118 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  118
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.118 Secondary Identifier:  ? PAC:31555494
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.118 0.5kb upstream 0.5kb upstream 2189 true AmTr_v1.0_scaffold00048: 2593157-2595345 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 2594846-2595345 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 0.5kb downstream 0.5kb downstream 2189 true AmTr_v1.0_scaffold00048: 2592657-2594845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 2592657-2593156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 1.0kb upstream 1.0kb upstream 2689 true AmTr_v1.0_scaffold00048: 2593157-2595845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 2594846-2595845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 1.0kb downstream 1.0kb downstream 2689 true AmTr_v1.0_scaffold00048: 2592157-2594845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 2592157-2593156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 2.0kb upstream 2.0kb upstream 3689 true AmTr_v1.0_scaffold00048: 2593157-2596845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 2594846-2596845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 2.0kb downstream 2.0kb downstream 3689 true AmTr_v1.0_scaffold00048: 2591157-2594845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 2591157-2593156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 5.0kb upstream 5.0kb upstream 6689 true AmTr_v1.0_scaffold00048: 2593157-2599845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 2594846-2599845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 5.0kb downstream 5.0kb downstream 6689 true AmTr_v1.0_scaffold00048: 2588157-2594845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 2588157-2593156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 10.0kb upstream 10.0kb upstream 11689 true AmTr_v1.0_scaffold00048: 2593157-2604845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 2594846-2604845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 10.0kb downstream 10.0kb downstream 11689 true AmTr_v1.0_scaffold00048: 2583157-2594845 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.118 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 2583157-2593156 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041181 5273 Angiosperm View MSA
121309811 5274 Embryophyte View MSA
123347464 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain