Gene : evm_27.TU.AmTr_v1.0_scaffold00047.50 A. trichopoda v1.0
Defline:  (1 of 1) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 Genomic Order:  46
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00047.50 Secondary Identifier:  ? PAC:31563652
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00047.50 0.5kb upstream 0.5kb upstream 26745 true AmTr_v1.0_scaffold00047: 1684696-1711440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00047: 1710941-1711440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 0.5kb downstream 0.5kb downstream 26745 true AmTr_v1.0_scaffold00047: 1684196-1710940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00047: 1684196-1684695 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 1.0kb upstream 1.0kb upstream 27245 true AmTr_v1.0_scaffold00047: 1684696-1711940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00047: 1710941-1711940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 1.0kb downstream 1.0kb downstream 27245 true AmTr_v1.0_scaffold00047: 1683696-1710940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00047: 1683696-1684695 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 2.0kb upstream 2.0kb upstream 28245 true AmTr_v1.0_scaffold00047: 1684696-1712940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00047: 1710941-1712940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 2.0kb downstream 2.0kb downstream 28245 true AmTr_v1.0_scaffold00047: 1682696-1710940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00047: 1682696-1684695 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 5.0kb upstream 5.0kb upstream 31245 true AmTr_v1.0_scaffold00047: 1684696-1715940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00047: 1710941-1715940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 5.0kb downstream 5.0kb downstream 31245 true AmTr_v1.0_scaffold00047: 1679696-1710940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00047: 1679696-1684695 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 10.0kb upstream 10.0kb upstream 36245 true AmTr_v1.0_scaffold00047: 1684696-1720940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00047: 1710941-1720940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 10.0kb downstream 10.0kb downstream 36245 true AmTr_v1.0_scaffold00047: 1674696-1710940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.50 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00047: 1674696-1684695 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043542 5273 Angiosperm View MSA
121345747 5274 Embryophyte View MSA
123380263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain