Gene : evm_27.TU.AmTr_v1.0_scaffold00046.27 A. trichopoda v1.0
Defline:  (1 of 2) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase Genomic Order:  27
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00046.27 Secondary Identifier:  ? PAC:31553492
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-1121 Amborella trichopoda pathologic  
Atrichopoda PWY-361 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00046.27 0.5kb upstream 0.5kb upstream 4019 true AmTr_v1.0_scaffold00046: 733127-737145 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00046: 736646-737145 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 0.5kb downstream 0.5kb downstream 4019 true AmTr_v1.0_scaffold00046: 732627-736645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00046: 732627-733126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 1.0kb upstream 1.0kb upstream 4519 true AmTr_v1.0_scaffold00046: 733127-737645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00046: 736646-737645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 1.0kb downstream 1.0kb downstream 4519 true AmTr_v1.0_scaffold00046: 732127-736645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00046: 732127-733126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 2.0kb upstream 2.0kb upstream 5519 true AmTr_v1.0_scaffold00046: 733127-738645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00046: 736646-738645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 2.0kb downstream 2.0kb downstream 5519 true AmTr_v1.0_scaffold00046: 731127-736645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00046: 731127-733126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 5.0kb upstream 5.0kb upstream 8519 true AmTr_v1.0_scaffold00046: 733127-741645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00046: 736646-741645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 5.0kb downstream 5.0kb downstream 8519 true AmTr_v1.0_scaffold00046: 728127-736645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00046: 728127-733126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 10.0kb upstream 10.0kb upstream 13519 true AmTr_v1.0_scaffold00046: 733127-746645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00046: 736646-746645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 10.0kb downstream 10.0kb downstream 13519 true AmTr_v1.0_scaffold00046: 723127-736645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.27 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00046: 723127-733126 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain