Gene : evm_27.TU.AmTr_v1.0_scaffold00047.123 A. trichopoda v1.0
Defline:  (1 of 41) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  116
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00047.123 Secondary Identifier:  ? PAC:31563669
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00047.123 0.5kb upstream 0.5kb upstream 4245 true AmTr_v1.0_scaffold00047: 3478326-3482570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00047: 3482071-3482570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 0.5kb downstream 0.5kb downstream 4245 true AmTr_v1.0_scaffold00047: 3477826-3482070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00047: 3477826-3478325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 1.0kb upstream 1.0kb upstream 4745 true AmTr_v1.0_scaffold00047: 3478326-3483070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00047: 3482071-3483070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 1.0kb downstream 1.0kb downstream 4745 true AmTr_v1.0_scaffold00047: 3477326-3482070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00047: 3477326-3478325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 2.0kb upstream 2.0kb upstream 5745 true AmTr_v1.0_scaffold00047: 3478326-3484070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00047: 3482071-3484070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 2.0kb downstream 2.0kb downstream 5745 true AmTr_v1.0_scaffold00047: 3476326-3482070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00047: 3476326-3478325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 5.0kb upstream 5.0kb upstream 8745 true AmTr_v1.0_scaffold00047: 3478326-3487070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00047: 3482071-3487070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 5.0kb downstream 5.0kb downstream 8745 true AmTr_v1.0_scaffold00047: 3473326-3482070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00047: 3473326-3478325 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 10.0kb upstream 10.0kb upstream 13745 true AmTr_v1.0_scaffold00047: 3478326-3492070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00047: 3482071-3492070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 10.0kb downstream 10.0kb downstream 13745 true AmTr_v1.0_scaffold00047: 3468326-3482070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00047.123 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00047: 3468326-3478325 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046804 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain