Gene : evm_27.TU.AmTr_v1.0_scaffold00052.39 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Genomic Order:  39
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00052.39 Secondary Identifier:  ? PAC:31574124
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00052.39 0.5kb upstream 0.5kb upstream 80804 true AmTr_v1.0_scaffold00052: 1555396-1636199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00052: 1635700-1636199 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 0.5kb downstream 0.5kb downstream 80804 true AmTr_v1.0_scaffold00052: 1554896-1635699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00052: 1554896-1555395 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 1.0kb upstream 1.0kb upstream 81304 true AmTr_v1.0_scaffold00052: 1555396-1636699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00052: 1635700-1636699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 1.0kb downstream 1.0kb downstream 81304 true AmTr_v1.0_scaffold00052: 1554396-1635699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00052: 1554396-1555395 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 2.0kb upstream 2.0kb upstream 82304 true AmTr_v1.0_scaffold00052: 1555396-1637699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00052: 1635700-1637699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 2.0kb downstream 2.0kb downstream 82304 true AmTr_v1.0_scaffold00052: 1553396-1635699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00052: 1553396-1555395 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 5.0kb upstream 5.0kb upstream 85304 true AmTr_v1.0_scaffold00052: 1555396-1640699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00052: 1635700-1640699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 5.0kb downstream 5.0kb downstream 85304 true AmTr_v1.0_scaffold00052: 1550396-1635699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00052: 1550396-1555395 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 10.0kb upstream 10.0kb upstream 90304 true AmTr_v1.0_scaffold00052: 1555396-1645699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00052: 1635700-1645699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 10.0kb downstream 10.0kb downstream 90304 true AmTr_v1.0_scaffold00052: 1545396-1635699 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00052.39 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00052: 1545396-1555395 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain