Gene : evm_27.TU.AmTr_v1.0_scaffold00050.49 A. trichopoda v1.0
Defline:  (1 of 6) PF04669 - Polysaccharide biosynthesis (Polysacc_synt_4) Genomic Order:  49
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00050.49 Secondary Identifier:  ? PAC:31571197
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00050.49 0.5kb upstream 0.5kb upstream 785 true AmTr_v1.0_scaffold00050: 3219376-3220160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00050: 3219661-3220160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 0.5kb downstream 0.5kb downstream 785 true AmTr_v1.0_scaffold00050: 3218876-3219660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00050: 3218876-3219375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 1.0kb upstream 1.0kb upstream 1285 true AmTr_v1.0_scaffold00050: 3219376-3220660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00050: 3219661-3220660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 1.0kb downstream 1.0kb downstream 1285 true AmTr_v1.0_scaffold00050: 3218376-3219660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00050: 3218376-3219375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 2.0kb upstream 2.0kb upstream 2285 true AmTr_v1.0_scaffold00050: 3219376-3221660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00050: 3219661-3221660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 2.0kb downstream 2.0kb downstream 2285 true AmTr_v1.0_scaffold00050: 3217376-3219660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00050: 3217376-3219375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 5.0kb upstream 5.0kb upstream 5285 true AmTr_v1.0_scaffold00050: 3219376-3224660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00050: 3219661-3224660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 5.0kb downstream 5.0kb downstream 5285 true AmTr_v1.0_scaffold00050: 3214376-3219660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00050: 3214376-3219375 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 10.0kb upstream 10.0kb upstream 10285 true AmTr_v1.0_scaffold00050: 3219376-3229660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00050: 3219661-3229660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 10.0kb downstream 10.0kb downstream 10285 true AmTr_v1.0_scaffold00050: 3209376-3219660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.49 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00050: 3209376-3219375 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051372 5273 Angiosperm View MSA
121312451 5274 Embryophyte View MSA
123349624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain