Gene : evm_27.TU.AmTr_v1.0_scaffold00051.59 A. trichopoda v1.0
Defline:  (1 of 2) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  58
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00051.59 Secondary Identifier:  ? PAC:31559134
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda SER-GLYSYN-PWY Amborella trichopoda pathologic  
Atrichopoda SERSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00051.59 0.5kb upstream 0.5kb upstream 20490 true AmTr_v1.0_scaffold00051: 2407161-2427650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00051: 2407161-2407660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 0.5kb downstream 0.5kb downstream 20490 true AmTr_v1.0_scaffold00051: 2407661-2428150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00051: 2427651-2428150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 1.0kb upstream 1.0kb upstream 20990 true AmTr_v1.0_scaffold00051: 2406661-2427650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00051: 2406661-2407660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 1.0kb downstream 1.0kb downstream 20990 true AmTr_v1.0_scaffold00051: 2407661-2428650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00051: 2427651-2428650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 2.0kb upstream 2.0kb upstream 21990 true AmTr_v1.0_scaffold00051: 2405661-2427650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00051: 2405661-2407660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 2.0kb downstream 2.0kb downstream 21990 true AmTr_v1.0_scaffold00051: 2407661-2429650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00051: 2427651-2429650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 5.0kb upstream 5.0kb upstream 24990 true AmTr_v1.0_scaffold00051: 2402661-2427650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00051: 2402661-2407660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 5.0kb downstream 5.0kb downstream 24990 true AmTr_v1.0_scaffold00051: 2407661-2432650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00051: 2427651-2432650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 10.0kb upstream 10.0kb upstream 29990 true AmTr_v1.0_scaffold00051: 2397661-2427650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00051: 2397661-2407660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 10.0kb downstream 10.0kb downstream 29990 true AmTr_v1.0_scaffold00051: 2407661-2437650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.59 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00051: 2427651-2437650 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain