Gene : evm_27.TU.AmTr_v1.0_scaffold00051.40 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21737:SF4 - CACTIN Genomic Order:  40
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00051.40 Secondary Identifier:  ? PAC:31559113
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00051.40 0.5kb upstream 0.5kb upstream 44558 true AmTr_v1.0_scaffold00051: 1128842-1173399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00051: 1128842-1129341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 0.5kb downstream 0.5kb downstream 44558 true AmTr_v1.0_scaffold00051: 1129342-1173899 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00051: 1173400-1173899 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 1.0kb upstream 1.0kb upstream 45058 true AmTr_v1.0_scaffold00051: 1128342-1173399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00051: 1128342-1129341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 1.0kb downstream 1.0kb downstream 45058 true AmTr_v1.0_scaffold00051: 1129342-1174399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00051: 1173400-1174399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 2.0kb upstream 2.0kb upstream 46058 true AmTr_v1.0_scaffold00051: 1127342-1173399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00051: 1127342-1129341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 2.0kb downstream 2.0kb downstream 46058 true AmTr_v1.0_scaffold00051: 1129342-1175399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00051: 1173400-1175399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 5.0kb upstream 5.0kb upstream 49058 true AmTr_v1.0_scaffold00051: 1124342-1173399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00051: 1124342-1129341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 5.0kb downstream 5.0kb downstream 49058 true AmTr_v1.0_scaffold00051: 1129342-1178399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00051: 1173400-1178399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 10.0kb upstream 10.0kb upstream 54058 true AmTr_v1.0_scaffold00051: 1119342-1173399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00051: 1119342-1129341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 10.0kb downstream 10.0kb downstream 54058 true AmTr_v1.0_scaffold00051: 1129342-1183399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00051.40 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00051: 1173400-1183399 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain