Gene : evm_27.TU.AmTr_v1.0_scaffold00049.50 A. trichopoda v1.0
Defline:  (1 of 5) PTHR11093 - RUVB-RELATED REPTIN AND PONTIN Genomic Order:  49
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00049.50 Secondary Identifier:  ? PAC:31574811
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00049.50 0.5kb upstream 0.5kb upstream 7051 true AmTr_v1.0_scaffold00049: 874991-882041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00049: 874991-875490 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 0.5kb downstream 0.5kb downstream 7051 true AmTr_v1.0_scaffold00049: 875491-882541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00049: 882042-882541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 1.0kb upstream 1.0kb upstream 7551 true AmTr_v1.0_scaffold00049: 874491-882041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00049: 874491-875490 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 1.0kb downstream 1.0kb downstream 7551 true AmTr_v1.0_scaffold00049: 875491-883041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00049: 882042-883041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 2.0kb upstream 2.0kb upstream 8551 true AmTr_v1.0_scaffold00049: 873491-882041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00049: 873491-875490 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 2.0kb downstream 2.0kb downstream 8551 true AmTr_v1.0_scaffold00049: 875491-884041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00049: 882042-884041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 5.0kb upstream 5.0kb upstream 11551 true AmTr_v1.0_scaffold00049: 870491-882041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00049: 870491-875490 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 5.0kb downstream 5.0kb downstream 11551 true AmTr_v1.0_scaffold00049: 875491-887041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00049: 882042-887041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 10.0kb upstream 10.0kb upstream 16551 true AmTr_v1.0_scaffold00049: 865491-882041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00049: 865491-875490 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 10.0kb downstream 10.0kb downstream 16551 true AmTr_v1.0_scaffold00049: 875491-892041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.50 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00049: 882042-892041 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045825 5273 Angiosperm View MSA
121346627 5274 Embryophyte View MSA
123423891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain