Gene : evm_27.TU.AmTr_v1.0_scaffold00049.272 A. trichopoda v1.0
Defline:  (1 of 25) PF02518 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Genomic Order:  268
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00049.272 Secondary Identifier:  ? PAC:31574705
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00049.272 0.5kb upstream 0.5kb upstream 11724 true AmTr_v1.0_scaffold00049: 4742042-4753765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00049: 4742042-4742541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 0.5kb downstream 0.5kb downstream 11724 true AmTr_v1.0_scaffold00049: 4742542-4754265 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00049: 4753766-4754265 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 1.0kb upstream 1.0kb upstream 12224 true AmTr_v1.0_scaffold00049: 4741542-4753765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00049: 4741542-4742541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 1.0kb downstream 1.0kb downstream 12224 true AmTr_v1.0_scaffold00049: 4742542-4754765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00049: 4753766-4754765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 2.0kb upstream 2.0kb upstream 13224 true AmTr_v1.0_scaffold00049: 4740542-4753765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00049: 4740542-4742541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 2.0kb downstream 2.0kb downstream 13224 true AmTr_v1.0_scaffold00049: 4742542-4755765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00049: 4753766-4755765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 5.0kb upstream 5.0kb upstream 16224 true AmTr_v1.0_scaffold00049: 4737542-4753765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00049: 4737542-4742541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 5.0kb downstream 5.0kb downstream 16224 true AmTr_v1.0_scaffold00049: 4742542-4758765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00049: 4753766-4758765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 10.0kb upstream 10.0kb upstream 21224 true AmTr_v1.0_scaffold00049: 4732542-4753765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00049: 4732542-4742541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 10.0kb downstream 10.0kb downstream 21224 true AmTr_v1.0_scaffold00049: 4742542-4763765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.272 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00049: 4753766-4763765 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045581 5273 Angiosperm View MSA
121347593 5274 Embryophyte View MSA
123426016 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain