Gene : evm_27.TU.AmTr_v1.0_scaffold00049.15 A. trichopoda v1.0
Defline:  (1 of 2) PTHR13131 - CYSTINOSIN Genomic Order:  15
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00049.15 Secondary Identifier:  ? PAC:31574660
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00049.15 0.5kb upstream 0.5kb upstream 16260 true AmTr_v1.0_scaffold00049: 218381-234640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00049: 234141-234640 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 0.5kb downstream 0.5kb downstream 16260 true AmTr_v1.0_scaffold00049: 217881-234140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00049: 217881-218380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 1.0kb upstream 1.0kb upstream 16760 true AmTr_v1.0_scaffold00049: 218381-235140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00049: 234141-235140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 1.0kb downstream 1.0kb downstream 16760 true AmTr_v1.0_scaffold00049: 217381-234140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00049: 217381-218380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 2.0kb upstream 2.0kb upstream 17760 true AmTr_v1.0_scaffold00049: 218381-236140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00049: 234141-236140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 2.0kb downstream 2.0kb downstream 17760 true AmTr_v1.0_scaffold00049: 216381-234140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00049: 216381-218380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 5.0kb upstream 5.0kb upstream 20760 true AmTr_v1.0_scaffold00049: 218381-239140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00049: 234141-239140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 5.0kb downstream 5.0kb downstream 20760 true AmTr_v1.0_scaffold00049: 213381-234140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00049: 213381-218380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 10.0kb upstream 10.0kb upstream 25760 true AmTr_v1.0_scaffold00049: 218381-244140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00049: 234141-244140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 10.0kb downstream 10.0kb downstream 25760 true AmTr_v1.0_scaffold00049: 208381-234140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.15 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00049: 208381-218380 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043856 5273 Angiosperm View MSA
121344453 5274 Embryophyte View MSA
123380048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain