Gene : evm_27.TU.AmTr_v1.0_scaffold00056.38 A. trichopoda v1.0
Defline:  (1 of 3) 1.13.11.70 - All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  38
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00056.38 Secondary Identifier:  ? PAC:31568298
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7101 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00056.38 0.5kb upstream 0.5kb upstream 2852 true AmTr_v1.0_scaffold00056: 567155-570006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00056: 569507-570006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 0.5kb downstream 0.5kb downstream 2852 true AmTr_v1.0_scaffold00056: 566655-569506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00056: 566655-567154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 1.0kb upstream 1.0kb upstream 3352 true AmTr_v1.0_scaffold00056: 567155-570506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00056: 569507-570506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 1.0kb downstream 1.0kb downstream 3352 true AmTr_v1.0_scaffold00056: 566155-569506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00056: 566155-567154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 2.0kb upstream 2.0kb upstream 4352 true AmTr_v1.0_scaffold00056: 567155-571506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00056: 569507-571506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 2.0kb downstream 2.0kb downstream 4352 true AmTr_v1.0_scaffold00056: 565155-569506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00056: 565155-567154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 5.0kb upstream 5.0kb upstream 7352 true AmTr_v1.0_scaffold00056: 567155-574506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00056: 569507-574506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 5.0kb downstream 5.0kb downstream 7352 true AmTr_v1.0_scaffold00056: 562155-569506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00056: 562155-567154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 10.0kb upstream 10.0kb upstream 12352 true AmTr_v1.0_scaffold00056: 567155-579506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00056: 569507-579506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 10.0kb downstream 10.0kb downstream 12352 true AmTr_v1.0_scaffold00056: 557155-569506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.38 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00056: 557155-567154 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain