Gene : evm_27.TU.AmTr_v1.0_scaffold00054.41 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10242:SF2 - N-GLYCOSYLASE/DNA LYASE Genomic Order:  41
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00054.41 Secondary Identifier:  ? PAC:31564538
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00054.41 0.5kb upstream 0.5kb upstream 8335 true AmTr_v1.0_scaffold00054: 1725944-1734278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00054: 1725944-1726443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 0.5kb downstream 0.5kb downstream 8335 true AmTr_v1.0_scaffold00054: 1726444-1734778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00054: 1734279-1734778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 1.0kb upstream 1.0kb upstream 8835 true AmTr_v1.0_scaffold00054: 1725444-1734278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00054: 1725444-1726443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 1.0kb downstream 1.0kb downstream 8835 true AmTr_v1.0_scaffold00054: 1726444-1735278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00054: 1734279-1735278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 2.0kb upstream 2.0kb upstream 9835 true AmTr_v1.0_scaffold00054: 1724444-1734278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00054: 1724444-1726443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 2.0kb downstream 2.0kb downstream 9835 true AmTr_v1.0_scaffold00054: 1726444-1736278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00054: 1734279-1736278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 5.0kb upstream 5.0kb upstream 12835 true AmTr_v1.0_scaffold00054: 1721444-1734278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00054: 1721444-1726443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 5.0kb downstream 5.0kb downstream 12835 true AmTr_v1.0_scaffold00054: 1726444-1739278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00054: 1734279-1739278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 10.0kb upstream 10.0kb upstream 17835 true AmTr_v1.0_scaffold00054: 1716444-1734278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00054: 1716444-1726443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 10.0kb downstream 10.0kb downstream 17835 true AmTr_v1.0_scaffold00054: 1726444-1744278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.41 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00054: 1734279-1744278 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046442 5273 Angiosperm View MSA
121344747 5274 Embryophyte View MSA
123428453 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain