Gene : evm_27.TU.AmTr_v1.0_scaffold00055.145 A. trichopoda v1.0
Defline:  (1 of 1) 1.2.1.8 - Betaine-aldehyde dehydrogenase / Betaine aldehyde oxidase Genomic Order:  144
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00055.145 Secondary Identifier:  ? PAC:31571684
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY1F-353 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00055.145 0.5kb upstream 0.5kb upstream 16394 true AmTr_v1.0_scaffold00055: 3884743-3901136 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00055: 3900637-3901136 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 0.5kb downstream 0.5kb downstream 16394 true AmTr_v1.0_scaffold00055: 3884243-3900636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00055: 3884243-3884742 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 1.0kb upstream 1.0kb upstream 16894 true AmTr_v1.0_scaffold00055: 3884743-3901636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00055: 3900637-3901636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 1.0kb downstream 1.0kb downstream 16894 true AmTr_v1.0_scaffold00055: 3883743-3900636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00055: 3883743-3884742 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 2.0kb upstream 2.0kb upstream 17894 true AmTr_v1.0_scaffold00055: 3884743-3902636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00055: 3900637-3902636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 2.0kb downstream 2.0kb downstream 17894 true AmTr_v1.0_scaffold00055: 3882743-3900636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00055: 3882743-3884742 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 5.0kb upstream 5.0kb upstream 20894 true AmTr_v1.0_scaffold00055: 3884743-3905636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00055: 3900637-3905636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 5.0kb downstream 5.0kb downstream 20894 true AmTr_v1.0_scaffold00055: 3879743-3900636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00055: 3879743-3884742 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 10.0kb upstream 10.0kb upstream 25894 true AmTr_v1.0_scaffold00055: 3884743-3910636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00055: 3900637-3910636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 10.0kb downstream 10.0kb downstream 25894 true AmTr_v1.0_scaffold00055: 3874743-3900636 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.145 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00055: 3874743-3884742 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042877 5273 Angiosperm View MSA
121345365 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain