Gene : evm_27.TU.AmTr_v1.0_scaffold00055.108 A. trichopoda v1.0

Defline:  (1 of 13) PF14476 - Petal formation-expressed (Chloroplast_duf) Genomic Order:  107
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00055.108 Secondary Identifier:  ? PAC:31571676

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00055.108 0.5kb upstream 0.5kb upstream 863 true AmTr_v1.0_scaffold00055: 3187847-3188709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00055: 3187847-3188346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 0.5kb downstream 0.5kb downstream 863 true AmTr_v1.0_scaffold00055: 3188347-3189209 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00055: 3188710-3189209 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 1.0kb upstream 1.0kb upstream 1363 true AmTr_v1.0_scaffold00055: 3187347-3188709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00055: 3187347-3188346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 1.0kb downstream 1.0kb downstream 1363 true AmTr_v1.0_scaffold00055: 3188347-3189709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00055: 3188710-3189709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 2.0kb upstream 2.0kb upstream 2363 true AmTr_v1.0_scaffold00055: 3186347-3188709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00055: 3186347-3188346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 2.0kb downstream 2.0kb downstream 2363 true AmTr_v1.0_scaffold00055: 3188347-3190709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00055: 3188710-3190709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 5.0kb upstream 5.0kb upstream 5363 true AmTr_v1.0_scaffold00055: 3183347-3188709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00055: 3183347-3188346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 5.0kb downstream 5.0kb downstream 5363 true AmTr_v1.0_scaffold00055: 3188347-3193709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00055: 3188710-3193709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 10.0kb upstream 10.0kb upstream 10363 true AmTr_v1.0_scaffold00055: 3178347-3188709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00055: 3178347-3188346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 10.0kb downstream 10.0kb downstream 10363 true AmTr_v1.0_scaffold00055: 3188347-3198709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.108 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00055: 3188710-3198709 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050743 5273 Angiosperm View MSA
121312094 5274 Embryophyte View MSA
123349298 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain