Gene : evm_27.TU.AmTr_v1.0_scaffold00053.25 A. trichopoda v1.0
Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  25
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00053.25 Secondary Identifier:  ? PAC:31555098
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ARG-PRO-PWY Amborella trichopoda pathologic  
Atrichopoda PROSYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3341 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00053.25 0.5kb upstream 0.5kb upstream 35114 true AmTr_v1.0_scaffold00053: 434969-470082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00053: 434969-435468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 0.5kb downstream 0.5kb downstream 35114 true AmTr_v1.0_scaffold00053: 435469-470582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00053: 470083-470582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 1.0kb upstream 1.0kb upstream 35614 true AmTr_v1.0_scaffold00053: 434469-470082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00053: 434469-435468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 1.0kb downstream 1.0kb downstream 35614 true AmTr_v1.0_scaffold00053: 435469-471082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00053: 470083-471082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 2.0kb upstream 2.0kb upstream 36614 true AmTr_v1.0_scaffold00053: 433469-470082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00053: 433469-435468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 2.0kb downstream 2.0kb downstream 36614 true AmTr_v1.0_scaffold00053: 435469-472082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00053: 470083-472082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 5.0kb upstream 5.0kb upstream 39614 true AmTr_v1.0_scaffold00053: 430469-470082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00053: 430469-435468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 5.0kb downstream 5.0kb downstream 39614 true AmTr_v1.0_scaffold00053: 435469-475082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00053: 470083-475082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 10.0kb upstream 10.0kb upstream 44614 true AmTr_v1.0_scaffold00053: 425469-470082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00053: 425469-435468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 10.0kb downstream 10.0kb downstream 44614 true AmTr_v1.0_scaffold00053: 435469-480082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.25 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00053: 470083-480082 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain