Gene : evm_27.TU.AmTr_v1.0_scaffold00053.8 A. trichopoda v1.0
Defline:  (1 of 3) PF04278 - Tic22-like family (Tic22) Genomic Order:  8
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00053.8 Secondary Identifier:  ? PAC:31555149
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00053.8 0.5kb upstream 0.5kb upstream 36295 true AmTr_v1.0_scaffold00053: 102122-138416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00053: 102122-102621 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 0.5kb downstream 0.5kb downstream 36295 true AmTr_v1.0_scaffold00053: 102622-138916 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00053: 138417-138916 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 1.0kb upstream 1.0kb upstream 36795 true AmTr_v1.0_scaffold00053: 101622-138416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00053: 101622-102621 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 1.0kb downstream 1.0kb downstream 36795 true AmTr_v1.0_scaffold00053: 102622-139416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00053: 138417-139416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 2.0kb upstream 2.0kb upstream 37795 true AmTr_v1.0_scaffold00053: 100622-138416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00053: 100622-102621 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 2.0kb downstream 2.0kb downstream 37795 true AmTr_v1.0_scaffold00053: 102622-140416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00053: 138417-140416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 5.0kb upstream 5.0kb upstream 40795 true AmTr_v1.0_scaffold00053: 97622-138416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00053: 97622-102621 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 5.0kb downstream 5.0kb downstream 40795 true AmTr_v1.0_scaffold00053: 102622-143416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00053: 138417-143416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 10.0kb upstream 10.0kb upstream 45795 true AmTr_v1.0_scaffold00053: 92622-138416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00053: 92622-102621 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 10.0kb downstream 10.0kb downstream 45795 true AmTr_v1.0_scaffold00053: 102622-148416 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.8 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00053: 138417-148416 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain