Gene : evm_27.TU.AmTr_v1.0_scaffold00057.282 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10459//PTHR10459:SF59 - DNA LIGASE Genomic Order:  280
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.282 Secondary Identifier:  ? PAC:31574448
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.282 0.5kb upstream 0.5kb upstream 18474 true AmTr_v1.0_scaffold00057: 4401836-4420309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 4401836-4402335 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 0.5kb downstream 0.5kb downstream 18474 true AmTr_v1.0_scaffold00057: 4402336-4420809 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 4420310-4420809 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 1.0kb upstream 1.0kb upstream 18974 true AmTr_v1.0_scaffold00057: 4401336-4420309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 4401336-4402335 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 1.0kb downstream 1.0kb downstream 18974 true AmTr_v1.0_scaffold00057: 4402336-4421309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 4420310-4421309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 2.0kb upstream 2.0kb upstream 19974 true AmTr_v1.0_scaffold00057: 4400336-4420309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 4400336-4402335 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 2.0kb downstream 2.0kb downstream 19974 true AmTr_v1.0_scaffold00057: 4402336-4422309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 4420310-4422309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 5.0kb upstream 5.0kb upstream 22974 true AmTr_v1.0_scaffold00057: 4397336-4420309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 4397336-4402335 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 5.0kb downstream 5.0kb downstream 22974 true AmTr_v1.0_scaffold00057: 4402336-4425309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 4420310-4425309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 10.0kb upstream 10.0kb upstream 27974 true AmTr_v1.0_scaffold00057: 4392336-4420309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 4392336-4402335 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 10.0kb downstream 10.0kb downstream 27974 true AmTr_v1.0_scaffold00057: 4402336-4430309 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.282 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 4420310-4430309 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051365 5273 Angiosperm View MSA
121345540 5274 Embryophyte View MSA
123380235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain