Gene : evm_27.TU.AmTr_v1.0_scaffold00058.104 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11468:SF3 - GLYCOGEN PHOSPHORYLASE Genomic Order:  102
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00058.104 Secondary Identifier:  ? PAC:31559263
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7238 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00058.104 0.5kb upstream 0.5kb upstream 18827 true AmTr_v1.0_scaffold00058: 1997559-2016385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00058: 2015886-2016385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 0.5kb downstream 0.5kb downstream 18827 true AmTr_v1.0_scaffold00058: 1997059-2015885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00058: 1997059-1997558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 1.0kb upstream 1.0kb upstream 19327 true AmTr_v1.0_scaffold00058: 1997559-2016885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00058: 2015886-2016885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 1.0kb downstream 1.0kb downstream 19327 true AmTr_v1.0_scaffold00058: 1996559-2015885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00058: 1996559-1997558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 2.0kb upstream 2.0kb upstream 20327 true AmTr_v1.0_scaffold00058: 1997559-2017885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00058: 2015886-2017885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 2.0kb downstream 2.0kb downstream 20327 true AmTr_v1.0_scaffold00058: 1995559-2015885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00058: 1995559-1997558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 5.0kb upstream 5.0kb upstream 23327 true AmTr_v1.0_scaffold00058: 1997559-2020885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00058: 2015886-2020885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 5.0kb downstream 5.0kb downstream 23327 true AmTr_v1.0_scaffold00058: 1992559-2015885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00058: 1992559-1997558 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 10.0kb upstream 10.0kb upstream 28327 true AmTr_v1.0_scaffold00058: 1997559-2025885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00058: 2015886-2025885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 10.0kb downstream 10.0kb downstream 28327 true AmTr_v1.0_scaffold00058: 1987559-2015885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.104 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00058: 1987559-1997558 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048524 5273 Angiosperm View MSA
121348195 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain