Gene : evm_27.TU.AmTr_v1.0_scaffold00057.191 A. trichopoda v1.0
Defline:  (1 of 2) PF02810 - SEC-C motif (SEC-C) Genomic Order:  190
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.191 Secondary Identifier:  ? PAC:31574307
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.191 0.5kb upstream 0.5kb upstream 18548 true AmTr_v1.0_scaffold00057: 3040613-3059160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 3040613-3041112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 0.5kb downstream 0.5kb downstream 18548 true AmTr_v1.0_scaffold00057: 3041113-3059660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 3059161-3059660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 1.0kb upstream 1.0kb upstream 19048 true AmTr_v1.0_scaffold00057: 3040113-3059160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 3040113-3041112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 1.0kb downstream 1.0kb downstream 19048 true AmTr_v1.0_scaffold00057: 3041113-3060160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 3059161-3060160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 2.0kb upstream 2.0kb upstream 20048 true AmTr_v1.0_scaffold00057: 3039113-3059160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 3039113-3041112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 2.0kb downstream 2.0kb downstream 20048 true AmTr_v1.0_scaffold00057: 3041113-3061160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 3059161-3061160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 5.0kb upstream 5.0kb upstream 23048 true AmTr_v1.0_scaffold00057: 3036113-3059160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 3036113-3041112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 5.0kb downstream 5.0kb downstream 23048 true AmTr_v1.0_scaffold00057: 3041113-3064160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 3059161-3064160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 10.0kb upstream 10.0kb upstream 28048 true AmTr_v1.0_scaffold00057: 3031113-3059160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 3031113-3041112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 10.0kb downstream 10.0kb downstream 28048 true AmTr_v1.0_scaffold00057: 3041113-3069160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.191 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 3059161-3069160 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045025 5273 Angiosperm View MSA
121346547 5274 Embryophyte View MSA
123380401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain