Gene : evm_27.TU.AmTr_v1.0_scaffold00057.185 A. trichopoda v1.0
Defline:  (1 of 2) PTHR22691 - YEAST SPT2-RELATED Genomic Order:  184
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.185 Secondary Identifier:  ? PAC:31574318
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.185 0.5kb upstream 0.5kb upstream 8597 true AmTr_v1.0_scaffold00057: 2889811-2898407 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 2897908-2898407 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 0.5kb downstream 0.5kb downstream 8597 true AmTr_v1.0_scaffold00057: 2889311-2897907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 2889311-2889810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 1.0kb upstream 1.0kb upstream 9097 true AmTr_v1.0_scaffold00057: 2889811-2898907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 2897908-2898907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 1.0kb downstream 1.0kb downstream 9097 true AmTr_v1.0_scaffold00057: 2888811-2897907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 2888811-2889810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 2.0kb upstream 2.0kb upstream 10097 true AmTr_v1.0_scaffold00057: 2889811-2899907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 2897908-2899907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 2.0kb downstream 2.0kb downstream 10097 true AmTr_v1.0_scaffold00057: 2887811-2897907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 2887811-2889810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 5.0kb upstream 5.0kb upstream 13097 true AmTr_v1.0_scaffold00057: 2889811-2902907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 2897908-2902907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 5.0kb downstream 5.0kb downstream 13097 true AmTr_v1.0_scaffold00057: 2884811-2897907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 2884811-2889810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 10.0kb upstream 10.0kb upstream 18097 true AmTr_v1.0_scaffold00057: 2889811-2907907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 2897908-2907907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 10.0kb downstream 10.0kb downstream 18097 true AmTr_v1.0_scaffold00057: 2879811-2897907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.185 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 2879811-2889810 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048073 5273 Angiosperm View MSA
121347399 5274 Embryophyte View MSA
123427511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain