Gene : evm_27.TU.AmTr_v1.0_scaffold00057.188 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11679:SF3 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 45 Genomic Order:  187
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.188 Secondary Identifier:  ? PAC:31574365
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.188 0.5kb upstream 0.5kb upstream 11823 true AmTr_v1.0_scaffold00057: 2968078-2979900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 2968078-2968577 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 0.5kb downstream 0.5kb downstream 11823 true AmTr_v1.0_scaffold00057: 2968578-2980400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 2979901-2980400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 1.0kb upstream 1.0kb upstream 12323 true AmTr_v1.0_scaffold00057: 2967578-2979900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 2967578-2968577 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 1.0kb downstream 1.0kb downstream 12323 true AmTr_v1.0_scaffold00057: 2968578-2980900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 2979901-2980900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 2.0kb upstream 2.0kb upstream 13323 true AmTr_v1.0_scaffold00057: 2966578-2979900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 2966578-2968577 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 2.0kb downstream 2.0kb downstream 13323 true AmTr_v1.0_scaffold00057: 2968578-2981900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 2979901-2981900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 5.0kb upstream 5.0kb upstream 16323 true AmTr_v1.0_scaffold00057: 2963578-2979900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 2963578-2968577 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 5.0kb downstream 5.0kb downstream 16323 true AmTr_v1.0_scaffold00057: 2968578-2984900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 2979901-2984900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 10.0kb upstream 10.0kb upstream 21323 true AmTr_v1.0_scaffold00057: 2958578-2979900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 2958578-2968577 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 10.0kb downstream 10.0kb downstream 21323 true AmTr_v1.0_scaffold00057: 2968578-2989900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.188 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 2979901-2989900 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044775 5273 Angiosperm View MSA
121347331 5274 Embryophyte View MSA
123424934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain