Gene : evm_27.TU.AmTr_v1.0_scaffold00057.205 A. trichopoda v1.0

Defline:  (1 of 2) PTHR23111//PTHR23111:SF29 - ZINC FINGER PROTEIN Genomic Order:  204
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.205 Secondary Identifier:  ? PAC:31574363

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.205 0.5kb upstream 0.5kb upstream 8457 true AmTr_v1.0_scaffold00057: 3314048-3322504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 3314048-3314547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 0.5kb downstream 0.5kb downstream 8457 true AmTr_v1.0_scaffold00057: 3314548-3323004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 3322505-3323004 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 1.0kb upstream 1.0kb upstream 8957 true AmTr_v1.0_scaffold00057: 3313548-3322504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 3313548-3314547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 1.0kb downstream 1.0kb downstream 8957 true AmTr_v1.0_scaffold00057: 3314548-3323504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 3322505-3323504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 2.0kb upstream 2.0kb upstream 9957 true AmTr_v1.0_scaffold00057: 3312548-3322504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 3312548-3314547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 2.0kb downstream 2.0kb downstream 9957 true AmTr_v1.0_scaffold00057: 3314548-3324504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 3322505-3324504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 5.0kb upstream 5.0kb upstream 12957 true AmTr_v1.0_scaffold00057: 3309548-3322504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 3309548-3314547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 5.0kb downstream 5.0kb downstream 12957 true AmTr_v1.0_scaffold00057: 3314548-3327504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 3322505-3327504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 10.0kb upstream 10.0kb upstream 17957 true AmTr_v1.0_scaffold00057: 3304548-3322504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 3304548-3314547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 10.0kb downstream 10.0kb downstream 17957 true AmTr_v1.0_scaffold00057: 3314548-3332504 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.205 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 3322505-3332504 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043265 5273 Angiosperm View MSA
121349230 5274 Embryophyte View MSA
123427278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain