Gene : evm_27.TU.AmTr_v1.0_scaffold00056.90 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10209:SF146 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  88
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00056.90 Secondary Identifier:  ? PAC:31568388
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ETHYL-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00056.90 0.5kb upstream 0.5kb upstream 10989 true AmTr_v1.0_scaffold00056: 1617833-1628821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00056: 1628322-1628821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 0.5kb downstream 0.5kb downstream 10989 true AmTr_v1.0_scaffold00056: 1617333-1628321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00056: 1617333-1617832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 1.0kb upstream 1.0kb upstream 11489 true AmTr_v1.0_scaffold00056: 1617833-1629321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00056: 1628322-1629321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 1.0kb downstream 1.0kb downstream 11489 true AmTr_v1.0_scaffold00056: 1616833-1628321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00056: 1616833-1617832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 2.0kb upstream 2.0kb upstream 12489 true AmTr_v1.0_scaffold00056: 1617833-1630321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00056: 1628322-1630321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 2.0kb downstream 2.0kb downstream 12489 true AmTr_v1.0_scaffold00056: 1615833-1628321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00056: 1615833-1617832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 5.0kb upstream 5.0kb upstream 15489 true AmTr_v1.0_scaffold00056: 1617833-1633321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00056: 1628322-1633321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 5.0kb downstream 5.0kb downstream 15489 true AmTr_v1.0_scaffold00056: 1612833-1628321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00056: 1612833-1617832 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 10.0kb upstream 10.0kb upstream 20489 true AmTr_v1.0_scaffold00056: 1617833-1638321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00056: 1628322-1638321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 10.0kb downstream 10.0kb downstream 20489 true AmTr_v1.0_scaffold00056: 1607833-1628321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.90 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00056: 1607833-1617832 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044176 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121345815 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain