Gene : evm_27.TU.AmTr_v1.0_scaffold00056.88 A. trichopoda v1.0
Defline:  (1 of 1) 1.14.11.6 - Thymine dioxygenase / Thymine,2-oxoglutarate dioxygenase Genomic Order:  86
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00056.88 Secondary Identifier:  ? PAC:31568262
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00056.88 0.5kb upstream 0.5kb upstream 12617 true AmTr_v1.0_scaffold00056: 1586519-1599135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00056: 1598636-1599135 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 0.5kb downstream 0.5kb downstream 12617 true AmTr_v1.0_scaffold00056: 1586019-1598635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00056: 1586019-1586518 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 1.0kb upstream 1.0kb upstream 13117 true AmTr_v1.0_scaffold00056: 1586519-1599635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00056: 1598636-1599635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 1.0kb downstream 1.0kb downstream 13117 true AmTr_v1.0_scaffold00056: 1585519-1598635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00056: 1585519-1586518 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 2.0kb upstream 2.0kb upstream 14117 true AmTr_v1.0_scaffold00056: 1586519-1600635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00056: 1598636-1600635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 2.0kb downstream 2.0kb downstream 14117 true AmTr_v1.0_scaffold00056: 1584519-1598635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00056: 1584519-1586518 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 5.0kb upstream 5.0kb upstream 17117 true AmTr_v1.0_scaffold00056: 1586519-1603635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00056: 1598636-1603635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 5.0kb downstream 5.0kb downstream 17117 true AmTr_v1.0_scaffold00056: 1581519-1598635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00056: 1581519-1586518 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 10.0kb upstream 10.0kb upstream 22117 true AmTr_v1.0_scaffold00056: 1586519-1608635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00056: 1598636-1608635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 10.0kb downstream 10.0kb downstream 22117 true AmTr_v1.0_scaffold00056: 1576519-1598635 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.88 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00056: 1576519-1586518 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044176 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121345815 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain