Gene : evm_27.TU.AmTr_v1.0_scaffold00060.35 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11102:SF84 - HCP-like superfamily protein-related Genomic Order:  35
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00060.35 Secondary Identifier:  ? PAC:31554900
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00060.35 0.5kb upstream 0.5kb upstream 38758 true AmTr_v1.0_scaffold00060: 1034436-1073193 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00060: 1072694-1073193 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 0.5kb downstream 0.5kb downstream 38758 true AmTr_v1.0_scaffold00060: 1033936-1072693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00060: 1033936-1034435 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 1.0kb upstream 1.0kb upstream 39258 true AmTr_v1.0_scaffold00060: 1034436-1073693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00060: 1072694-1073693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 1.0kb downstream 1.0kb downstream 39258 true AmTr_v1.0_scaffold00060: 1033436-1072693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00060: 1033436-1034435 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 2.0kb upstream 2.0kb upstream 40258 true AmTr_v1.0_scaffold00060: 1034436-1074693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00060: 1072694-1074693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 2.0kb downstream 2.0kb downstream 40258 true AmTr_v1.0_scaffold00060: 1032436-1072693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00060: 1032436-1034435 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 5.0kb upstream 5.0kb upstream 43258 true AmTr_v1.0_scaffold00060: 1034436-1077693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00060: 1072694-1077693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 5.0kb downstream 5.0kb downstream 43258 true AmTr_v1.0_scaffold00060: 1029436-1072693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00060: 1029436-1034435 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 10.0kb upstream 10.0kb upstream 48258 true AmTr_v1.0_scaffold00060: 1034436-1082693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00060: 1072694-1082693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 10.0kb downstream 10.0kb downstream 48258 true AmTr_v1.0_scaffold00060: 1024436-1072693 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.35 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00060: 1024436-1034435 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain