Gene : evm_27.TU.AmTr_v1.0_scaffold00060.143 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23153:SF39 - CDC48-INTERACTING UBX-DOMAIN PROTEIN Genomic Order:  142
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00060.143 Secondary Identifier:  ? PAC:31554790
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00060.143 0.5kb upstream 0.5kb upstream 18108 true AmTr_v1.0_scaffold00060: 3665188-3683295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00060: 3682796-3683295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 0.5kb downstream 0.5kb downstream 18108 true AmTr_v1.0_scaffold00060: 3664688-3682795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00060: 3664688-3665187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 1.0kb upstream 1.0kb upstream 18608 true AmTr_v1.0_scaffold00060: 3665188-3683795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00060: 3682796-3683795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 1.0kb downstream 1.0kb downstream 18608 true AmTr_v1.0_scaffold00060: 3664188-3682795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00060: 3664188-3665187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 2.0kb upstream 2.0kb upstream 19608 true AmTr_v1.0_scaffold00060: 3665188-3684795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00060: 3682796-3684795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 2.0kb downstream 2.0kb downstream 19608 true AmTr_v1.0_scaffold00060: 3663188-3682795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00060: 3663188-3665187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 5.0kb upstream 5.0kb upstream 22608 true AmTr_v1.0_scaffold00060: 3665188-3687795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00060: 3682796-3687795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 5.0kb downstream 5.0kb downstream 22608 true AmTr_v1.0_scaffold00060: 3660188-3682795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00060: 3660188-3665187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 10.0kb upstream 10.0kb upstream 27608 true AmTr_v1.0_scaffold00060: 3665188-3692795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00060: 3682796-3692795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 10.0kb downstream 10.0kb downstream 27608 true AmTr_v1.0_scaffold00060: 3655188-3682795 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.143 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00060: 3655188-3665187 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047714 5273 Angiosperm View MSA
121346643 5274 Embryophyte View MSA
123428120 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain