Gene : evm_27.TU.AmTr_v1.0_scaffold00060.73 A. trichopoda v1.0
Defline:  (1 of 1) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase Genomic Order:  73
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00060.73 Secondary Identifier:  ? PAC:31554879
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda NAGLIPASYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00060.73 0.5kb upstream 0.5kb upstream 48838 true AmTr_v1.0_scaffold00060: 1891335-1940172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00060: 1891335-1891834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 0.5kb downstream 0.5kb downstream 48838 true AmTr_v1.0_scaffold00060: 1891835-1940672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00060: 1940173-1940672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 1.0kb upstream 1.0kb upstream 49338 true AmTr_v1.0_scaffold00060: 1890835-1940172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00060: 1890835-1891834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 1.0kb downstream 1.0kb downstream 49338 true AmTr_v1.0_scaffold00060: 1891835-1941172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00060: 1940173-1941172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 2.0kb upstream 2.0kb upstream 50338 true AmTr_v1.0_scaffold00060: 1889835-1940172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00060: 1889835-1891834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 2.0kb downstream 2.0kb downstream 50338 true AmTr_v1.0_scaffold00060: 1891835-1942172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00060: 1940173-1942172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 5.0kb upstream 5.0kb upstream 53338 true AmTr_v1.0_scaffold00060: 1886835-1940172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00060: 1886835-1891834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 5.0kb downstream 5.0kb downstream 53338 true AmTr_v1.0_scaffold00060: 1891835-1945172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00060: 1940173-1945172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 10.0kb upstream 10.0kb upstream 58338 true AmTr_v1.0_scaffold00060: 1881835-1940172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00060: 1881835-1891834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 10.0kb downstream 10.0kb downstream 58338 true AmTr_v1.0_scaffold00060: 1891835-1950172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.73 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00060: 1940173-1950172 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046520 5273 Angiosperm View MSA
121346728 5274 Embryophyte View MSA
123424011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain