Gene : evm_27.TU.AmTr_v1.0_scaffold00060.56 A. trichopoda v1.0
Defline:  (1 of 1) PTHR16023 - TAX1 BINDING PROTEIN-RELATED Genomic Order:  56
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00060.56 Secondary Identifier:  ? PAC:31554829
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00060.56 0.5kb upstream 0.5kb upstream 51193 true AmTr_v1.0_scaffold00060: 1530257-1581449 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00060: 1580950-1581449 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 0.5kb downstream 0.5kb downstream 51193 true AmTr_v1.0_scaffold00060: 1529757-1580949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00060: 1529757-1530256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 1.0kb upstream 1.0kb upstream 51693 true AmTr_v1.0_scaffold00060: 1530257-1581949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00060: 1580950-1581949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 1.0kb downstream 1.0kb downstream 51693 true AmTr_v1.0_scaffold00060: 1529257-1580949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00060: 1529257-1530256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 2.0kb upstream 2.0kb upstream 52693 true AmTr_v1.0_scaffold00060: 1530257-1582949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00060: 1580950-1582949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 2.0kb downstream 2.0kb downstream 52693 true AmTr_v1.0_scaffold00060: 1528257-1580949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00060: 1528257-1530256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 5.0kb upstream 5.0kb upstream 55693 true AmTr_v1.0_scaffold00060: 1530257-1585949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00060: 1580950-1585949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 5.0kb downstream 5.0kb downstream 55693 true AmTr_v1.0_scaffold00060: 1525257-1580949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00060: 1525257-1530256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 10.0kb upstream 10.0kb upstream 60693 true AmTr_v1.0_scaffold00060: 1530257-1590949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00060: 1580950-1590949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 10.0kb downstream 10.0kb downstream 60693 true AmTr_v1.0_scaffold00060: 1520257-1580949 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00060.56 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00060: 1520257-1530256 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047421 5273 Angiosperm View MSA
121346915 5274 Embryophyte View MSA
123428205 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain