Gene : evm_27.TU.AmTr_v1.0_scaffold00059.56 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10381:SF8 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC Genomic Order:  55
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.56 Secondary Identifier:  ? PAC:31565842
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.56 0.5kb upstream 0.5kb upstream 13584 true AmTr_v1.0_scaffold00059: 895013-908596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 895013-895512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 0.5kb downstream 0.5kb downstream 13584 true AmTr_v1.0_scaffold00059: 895513-909096 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 908597-909096 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 1.0kb upstream 1.0kb upstream 14084 true AmTr_v1.0_scaffold00059: 894513-908596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 894513-895512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 1.0kb downstream 1.0kb downstream 14084 true AmTr_v1.0_scaffold00059: 895513-909596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 908597-909596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 2.0kb upstream 2.0kb upstream 15084 true AmTr_v1.0_scaffold00059: 893513-908596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 893513-895512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 2.0kb downstream 2.0kb downstream 15084 true AmTr_v1.0_scaffold00059: 895513-910596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 908597-910596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 5.0kb upstream 5.0kb upstream 18084 true AmTr_v1.0_scaffold00059: 890513-908596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 890513-895512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 5.0kb downstream 5.0kb downstream 18084 true AmTr_v1.0_scaffold00059: 895513-913596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 908597-913596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 10.0kb upstream 10.0kb upstream 23084 true AmTr_v1.0_scaffold00059: 885513-908596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 885513-895512 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 10.0kb downstream 10.0kb downstream 23084 true AmTr_v1.0_scaffold00059: 895513-918596 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.56 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 908597-918596 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046874 5273 Angiosperm View MSA
121344835 5274 Embryophyte View MSA
123426609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain