Gene : evm_27.TU.AmTr_v1.0_scaffold00059.34 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  33
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.34 Secondary Identifier:  ? PAC:31565854
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-3781 Amborella trichopoda pathologic  
Atrichopoda PWY-4302 Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  
Atrichopoda PWY-5690 Amborella trichopoda pathologic  
Atrichopoda PWY-7279 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.34 0.5kb upstream 0.5kb upstream 12080 true AmTr_v1.0_scaffold00059: 524800-536879 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 536380-536879 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 0.5kb downstream 0.5kb downstream 12080 true AmTr_v1.0_scaffold00059: 524300-536379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 524300-524799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 1.0kb upstream 1.0kb upstream 12580 true AmTr_v1.0_scaffold00059: 524800-537379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 536380-537379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 1.0kb downstream 1.0kb downstream 12580 true AmTr_v1.0_scaffold00059: 523800-536379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 523800-524799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 2.0kb upstream 2.0kb upstream 13580 true AmTr_v1.0_scaffold00059: 524800-538379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 536380-538379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 2.0kb downstream 2.0kb downstream 13580 true AmTr_v1.0_scaffold00059: 522800-536379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 522800-524799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 5.0kb upstream 5.0kb upstream 16580 true AmTr_v1.0_scaffold00059: 524800-541379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 536380-541379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 5.0kb downstream 5.0kb downstream 16580 true AmTr_v1.0_scaffold00059: 519800-536379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 519800-524799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 10.0kb upstream 10.0kb upstream 21580 true AmTr_v1.0_scaffold00059: 524800-546379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 536380-546379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 10.0kb downstream 10.0kb downstream 21580 true AmTr_v1.0_scaffold00059: 514800-536379 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.34 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 514800-524799 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain