Gene : evm_27.TU.AmTr_v1.0_scaffold00059.139 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 Genomic Order:  138
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.139 Secondary Identifier:  ? PAC:31565955
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.139 0.5kb upstream 0.5kb upstream 1208 true AmTr_v1.0_scaffold00059: 2308407-2309614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 2308407-2308906 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 0.5kb downstream 0.5kb downstream 1208 true AmTr_v1.0_scaffold00059: 2308907-2310114 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 2309615-2310114 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 1.0kb upstream 1.0kb upstream 1708 true AmTr_v1.0_scaffold00059: 2307907-2309614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 2307907-2308906 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 1.0kb downstream 1.0kb downstream 1708 true AmTr_v1.0_scaffold00059: 2308907-2310614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 2309615-2310614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 2.0kb upstream 2.0kb upstream 2708 true AmTr_v1.0_scaffold00059: 2306907-2309614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 2306907-2308906 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 2.0kb downstream 2.0kb downstream 2708 true AmTr_v1.0_scaffold00059: 2308907-2311614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 2309615-2311614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 5.0kb upstream 5.0kb upstream 5708 true AmTr_v1.0_scaffold00059: 2303907-2309614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 2303907-2308906 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 5.0kb downstream 5.0kb downstream 5708 true AmTr_v1.0_scaffold00059: 2308907-2314614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 2309615-2314614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 10.0kb upstream 10.0kb upstream 10708 true AmTr_v1.0_scaffold00059: 2298907-2309614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 2298907-2308906 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 10.0kb downstream 10.0kb downstream 10708 true AmTr_v1.0_scaffold00059: 2308907-2319614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.139 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 2309615-2319614 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain