Gene : evm_27.TU.AmTr_v1.0_scaffold00059.144 A. trichopoda v1.0
Defline:  (1 of 2) PTHR16201:SF43 - PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN Genomic Order:  142
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.144 Secondary Identifier:  ? PAC:31565830
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.144 0.5kb upstream 0.5kb upstream 9716 true AmTr_v1.0_scaffold00059: 2398099-2407814 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 2407315-2407814 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 0.5kb downstream 0.5kb downstream 9716 true AmTr_v1.0_scaffold00059: 2397599-2407314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 2397599-2398098 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 1.0kb upstream 1.0kb upstream 10216 true AmTr_v1.0_scaffold00059: 2398099-2408314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 2407315-2408314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 1.0kb downstream 1.0kb downstream 10216 true AmTr_v1.0_scaffold00059: 2397099-2407314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 2397099-2398098 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 2.0kb upstream 2.0kb upstream 11216 true AmTr_v1.0_scaffold00059: 2398099-2409314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 2407315-2409314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 2.0kb downstream 2.0kb downstream 11216 true AmTr_v1.0_scaffold00059: 2396099-2407314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 2396099-2398098 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 5.0kb upstream 5.0kb upstream 14216 true AmTr_v1.0_scaffold00059: 2398099-2412314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 2407315-2412314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 5.0kb downstream 5.0kb downstream 14216 true AmTr_v1.0_scaffold00059: 2393099-2407314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 2393099-2398098 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 10.0kb upstream 10.0kb upstream 19216 true AmTr_v1.0_scaffold00059: 2398099-2417314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 2407315-2417314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 10.0kb downstream 10.0kb downstream 19216 true AmTr_v1.0_scaffold00059: 2388099-2407314 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.144 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 2388099-2398098 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain