Gene : evm_27.TU.AmTr_v1.0_scaffold00059.127 A. trichopoda v1.0
Defline:  (1 of 2) PTHR13286:SF6 - HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30L Genomic Order:  126
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.127 Secondary Identifier:  ? PAC:31565942
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.127 0.5kb upstream 0.5kb upstream 3831 true AmTr_v1.0_scaffold00059: 2070616-2074446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 2073947-2074446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 0.5kb downstream 0.5kb downstream 3831 true AmTr_v1.0_scaffold00059: 2070116-2073946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 2070116-2070615 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 1.0kb upstream 1.0kb upstream 4331 true AmTr_v1.0_scaffold00059: 2070616-2074946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 2073947-2074946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 1.0kb downstream 1.0kb downstream 4331 true AmTr_v1.0_scaffold00059: 2069616-2073946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 2069616-2070615 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 2.0kb upstream 2.0kb upstream 5331 true AmTr_v1.0_scaffold00059: 2070616-2075946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 2073947-2075946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 2.0kb downstream 2.0kb downstream 5331 true AmTr_v1.0_scaffold00059: 2068616-2073946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 2068616-2070615 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 5.0kb upstream 5.0kb upstream 8331 true AmTr_v1.0_scaffold00059: 2070616-2078946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 2073947-2078946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 5.0kb downstream 5.0kb downstream 8331 true AmTr_v1.0_scaffold00059: 2065616-2073946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 2065616-2070615 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 10.0kb upstream 10.0kb upstream 13331 true AmTr_v1.0_scaffold00059: 2070616-2083946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 2073947-2083946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 10.0kb downstream 10.0kb downstream 13331 true AmTr_v1.0_scaffold00059: 2060616-2073946 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.127 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 2060616-2070615 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain