Gene : evm_27.TU.AmTr_v1.0_scaffold00059.222 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11139:SF71 - SERINE/THREONINE-PROTEIN KINASE SMG1 Genomic Order:  219
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.222 Secondary Identifier:  ? PAC:31566019
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.222 0.5kb upstream 0.5kb upstream 18613 true AmTr_v1.0_scaffold00059: 3681338-3699950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 3681338-3681837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 0.5kb downstream 0.5kb downstream 18613 true AmTr_v1.0_scaffold00059: 3681838-3700450 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 3699951-3700450 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 1.0kb upstream 1.0kb upstream 19113 true AmTr_v1.0_scaffold00059: 3680838-3699950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 3680838-3681837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 1.0kb downstream 1.0kb downstream 19113 true AmTr_v1.0_scaffold00059: 3681838-3700950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 3699951-3700950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 2.0kb upstream 2.0kb upstream 20113 true AmTr_v1.0_scaffold00059: 3679838-3699950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 3679838-3681837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 2.0kb downstream 2.0kb downstream 20113 true AmTr_v1.0_scaffold00059: 3681838-3701950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 3699951-3701950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 5.0kb upstream 5.0kb upstream 23113 true AmTr_v1.0_scaffold00059: 3676838-3699950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 3676838-3681837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 5.0kb downstream 5.0kb downstream 23113 true AmTr_v1.0_scaffold00059: 3681838-3704950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 3699951-3704950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 10.0kb upstream 10.0kb upstream 28113 true AmTr_v1.0_scaffold00059: 3671838-3699950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 3671838-3681837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 10.0kb downstream 10.0kb downstream 28113 true AmTr_v1.0_scaffold00059: 3681838-3709950 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.222 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 3699951-3709950 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046807 5273 Angiosperm View MSA
121348670 5274 Embryophyte View MSA
123425696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain