Gene : evm_27.TU.AmTr_v1.0_scaffold00059.213 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12970 - TUMOR NECROSIS FACTOR SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 CLAST3 Genomic Order:  210
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.213 Secondary Identifier:  ? PAC:31566060
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.213 0.5kb upstream 0.5kb upstream 9240 true AmTr_v1.0_scaffold00059: 3430674-3439913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 3439414-3439913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 0.5kb downstream 0.5kb downstream 9240 true AmTr_v1.0_scaffold00059: 3430174-3439413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 3430174-3430673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 1.0kb upstream 1.0kb upstream 9740 true AmTr_v1.0_scaffold00059: 3430674-3440413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 3439414-3440413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 1.0kb downstream 1.0kb downstream 9740 true AmTr_v1.0_scaffold00059: 3429674-3439413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 3429674-3430673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 2.0kb upstream 2.0kb upstream 10740 true AmTr_v1.0_scaffold00059: 3430674-3441413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 3439414-3441413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 2.0kb downstream 2.0kb downstream 10740 true AmTr_v1.0_scaffold00059: 3428674-3439413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 3428674-3430673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 5.0kb upstream 5.0kb upstream 13740 true AmTr_v1.0_scaffold00059: 3430674-3444413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 3439414-3444413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 5.0kb downstream 5.0kb downstream 13740 true AmTr_v1.0_scaffold00059: 3425674-3439413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 3425674-3430673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 10.0kb upstream 10.0kb upstream 18740 true AmTr_v1.0_scaffold00059: 3430674-3449413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 3439414-3449413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 10.0kb downstream 10.0kb downstream 18740 true AmTr_v1.0_scaffold00059: 3420674-3439413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.213 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 3420674-3430673 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043036 5273 Angiosperm View MSA
121344362 5274 Embryophyte View MSA
123425402 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain