Gene : evm_27.TU.AmTr_v1.0_scaffold00059.189 A. trichopoda v1.0
Defline:  (1 of 1) PTHR16092 - SEC3/SYNTAXIN-RELATED Genomic Order:  186
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00059.189 Secondary Identifier:  ? PAC:31565916
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00059.189 0.5kb upstream 0.5kb upstream 19319 true AmTr_v1.0_scaffold00059: 2952523-2971841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00059: 2952523-2953022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 0.5kb downstream 0.5kb downstream 19319 true AmTr_v1.0_scaffold00059: 2953023-2972341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00059: 2971842-2972341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 1.0kb upstream 1.0kb upstream 19819 true AmTr_v1.0_scaffold00059: 2952023-2971841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00059: 2952023-2953022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 1.0kb downstream 1.0kb downstream 19819 true AmTr_v1.0_scaffold00059: 2953023-2972841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00059: 2971842-2972841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 2.0kb upstream 2.0kb upstream 20819 true AmTr_v1.0_scaffold00059: 2951023-2971841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00059: 2951023-2953022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 2.0kb downstream 2.0kb downstream 20819 true AmTr_v1.0_scaffold00059: 2953023-2973841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00059: 2971842-2973841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 5.0kb upstream 5.0kb upstream 23819 true AmTr_v1.0_scaffold00059: 2948023-2971841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00059: 2948023-2953022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 5.0kb downstream 5.0kb downstream 23819 true AmTr_v1.0_scaffold00059: 2953023-2976841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00059: 2971842-2976841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 10.0kb upstream 10.0kb upstream 28819 true AmTr_v1.0_scaffold00059: 2943023-2971841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00059: 2943023-2953022 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 10.0kb downstream 10.0kb downstream 28819 true AmTr_v1.0_scaffold00059: 2953023-2981841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00059.189 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00059: 2971842-2981841 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain