Gene : evm_27.TU.AmTr_v1.0_scaffold00058.233 A. trichopoda v1.0
Defline:  (1 of 72) PF00847 - AP2 domain (AP2) Genomic Order:  229
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00058.233 Secondary Identifier:  ? PAC:31559155
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00058.233 0.5kb upstream 0.5kb upstream 10512 true AmTr_v1.0_scaffold00058: 4301144-4311655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00058: 4301144-4301643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 0.5kb downstream 0.5kb downstream 10512 true AmTr_v1.0_scaffold00058: 4301644-4312155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00058: 4311656-4312155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 1.0kb upstream 1.0kb upstream 11012 true AmTr_v1.0_scaffold00058: 4300644-4311655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00058: 4300644-4301643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 1.0kb downstream 1.0kb downstream 11012 true AmTr_v1.0_scaffold00058: 4301644-4312655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00058: 4311656-4312655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 2.0kb upstream 2.0kb upstream 12012 true AmTr_v1.0_scaffold00058: 4299644-4311655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00058: 4299644-4301643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 2.0kb downstream 2.0kb downstream 12012 true AmTr_v1.0_scaffold00058: 4301644-4313655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00058: 4311656-4313655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 5.0kb upstream 5.0kb upstream 15012 true AmTr_v1.0_scaffold00058: 4296644-4311655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00058: 4296644-4301643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 5.0kb downstream 5.0kb downstream 15012 true AmTr_v1.0_scaffold00058: 4301644-4316655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00058: 4311656-4316655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 10.0kb upstream 10.0kb upstream 20012 true AmTr_v1.0_scaffold00058: 4291644-4311655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00058: 4291644-4301643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 10.0kb downstream 10.0kb downstream 20012 true AmTr_v1.0_scaffold00058: 4301644-4321655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.233 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00058: 4311656-4321655 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048661 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121311060 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain