Gene : evm_27.TU.AmTr_v1.0_scaffold00058.73 A. trichopoda v1.0
Defline:  (1 of 8) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  71
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00058.73 Secondary Identifier:  ? PAC:31559265
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00058.73 0.5kb upstream 0.5kb upstream 7913 true AmTr_v1.0_scaffold00058: 1490286-1498198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00058: 1490286-1490785 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 0.5kb downstream 0.5kb downstream 7913 true AmTr_v1.0_scaffold00058: 1490786-1498698 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00058: 1498199-1498698 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 1.0kb upstream 1.0kb upstream 8413 true AmTr_v1.0_scaffold00058: 1489786-1498198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00058: 1489786-1490785 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 1.0kb downstream 1.0kb downstream 8413 true AmTr_v1.0_scaffold00058: 1490786-1499198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00058: 1498199-1499198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 2.0kb upstream 2.0kb upstream 9413 true AmTr_v1.0_scaffold00058: 1488786-1498198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00058: 1488786-1490785 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 2.0kb downstream 2.0kb downstream 9413 true AmTr_v1.0_scaffold00058: 1490786-1500198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00058: 1498199-1500198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 5.0kb upstream 5.0kb upstream 12413 true AmTr_v1.0_scaffold00058: 1485786-1498198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00058: 1485786-1490785 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 5.0kb downstream 5.0kb downstream 12413 true AmTr_v1.0_scaffold00058: 1490786-1503198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00058: 1498199-1503198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 10.0kb upstream 10.0kb upstream 17413 true AmTr_v1.0_scaffold00058: 1480786-1498198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00058: 1480786-1490785 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 10.0kb downstream 10.0kb downstream 17413 true AmTr_v1.0_scaffold00058: 1490786-1508198 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.73 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00058: 1498199-1508198 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048525 5273 Angiosperm View MSA
121311004 5274 Embryophyte View MSA
123348362 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain